CDS

Accession Number TCMCG034C24163
gbkey CDS
Protein Id XP_008391535.2
Location complement(join(4415897..4415938,4416055..4416141,4416241..4416315,4416433..4416549,4416715..4416801,4417037..4417102,4417516..4417564,4417566..4417579,4417884..4417955,4418046..4418147,4418245..4418422,4418522..4418577,4418667..4418777,4418897..4418965,4419139..4419247,4419332..4419420,4419534..4419611,4420112..4420234,4420341..4420460,4420571..4420651,4420724..4420870,4420966..4421044,4421448..4421522,4422320..4422429,4422925..4423023,4423324..4423439,4423534..4423642,4423721..4423939,4424040..4424305,4425127..4425284,4425386..4425533,4425757..4425829,4426057..4426086))
Gene LOC103453747
GeneID 103453747
Organism Malus domestica

Protein

Length 1118aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA534520
db_source XM_008393313.3
Definition LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 12 [Malus domestica]

EGGNOG-MAPPER Annotation

COG_category O
Description Ubiquitin carboxyl-terminal hydrolase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K11838        [VIEW IN KEGG]
EC 3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04068        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map04068        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004843        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008233        [VIEW IN EMBL-EBI]
GO:0008234        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009867        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019783        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0036459        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070011        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071395        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0101005        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACTATGATGACCCCTGCACCATTAGATCAGCAGCAGCAAGAGGACGAAGAGATGCTTGTGCCGCACTCGGATGTGGTCGAAGGCCCTCAGCCTATGGAAGTAGCTCAAGTGGAGCCAGCTAGTACAGTTGATAGTCAGCCAGTGGAGGATCCTCCAACGATGAAATTCACTTGGACAATTGAGAATTTTACTAGGTTGAACACCAAGAAGCACTACTCTGACACGTTCGTTGTTGGCGGCTATAAATGGCGGATATTGATATTTCCCAAGGGAAACAATGTGGACTACTTGTCAATGTATTTGGATGTGGCAGATTCTGGGACATTGCCATATGGATGGAGTAGATATGCGCACTTCAGCTTGGCTGTAGTTAATCAGATCCATACCAAGTACTCAATAAGAAAGGACACACAACACCAGTTCAACGCAAGAGAAAGTGACTGGGGATTCACTTCCTTCATGCTTCTTGGTGATCTCTATGACCTGAGTAGGGGATATCTGGTGAACGATACAGTTGTGGTTGAAGCTGAGGTTGCTGTCCGTAAGGTTCTTGATTACTGGTCATATGACTCGAAAAAGGAAACTGGTTATGTTGGGCTCAAGAATCAGGGAGCAACTTGTTATATGAATTCTCTTCTCCAGACTTTGTACCATATACCGTACTTCAGAAAGGCCGTGTATCATATGCCAACAACTGAGAATGACATGCCTTCAGGAAGCATTCCTTTGGCACTACAAAGTTTGTTCTATAAGCTTCAATACAATGACAGCAGTGTTGCAACCAAAGAATTGACCAAGTCCTTTGGATGGGATACATATGATTCTTTTATGCAACATGATGTGCAGGAACTTAATAGAGTTCTTTGTGAAAAGCTTGAAGATAAAATGAAGGGAACTGTTGTGGAGGGTACAATACAGCAGTTGTTTGAAGGACATCACATGAATTACATTGAATGCATCAACGTGGACTACAAATCTACAAGAAAAGAATCATTTTATGACCTCCAGCTTGATGTGAAAGGCTGCCGGGATGTTTATGCTTCATTTGACAAGTATGTGGAAGTTGAACGTCTAGAGGGTGACAATAAATACCACGCCGAAGAACATGGTTTGCAGGATGCTAAGAAGGGTGTCCTATTTATTGACTTCCCTCCCGTTCTTCAACTTCAGTTAAAGCGATTTGAGTATGATTTTATGCGGGACACAATGGTTAAGATAAATGATCGCTATGAATTTCCTCTCCAACTTGACCTTGATAGGGAGAATGGAAAATATCTATCACCTGACTCAGATAAGAGTGTTCGCAACCTCTACACCCTTCATAGTGTCTTGGTTCATAGTGGTGGGGTGCATGGTGGACATTACTACGCTTTCATCAGACCAACCCTTTCTGACCAGTGGTACAAATTTGATGATGAACGTGTGACAAAAGAGGATGTGAAGAGGGCTTTAGAAGAGCAGTATGGTGGTGAGGAAGAGTTGCCACAGACCAATCCTGGCTTCAATAATACTCCTTTCAAATTTACAAAGTACTCAAATGCATACATGCTTGTGTATATACGGGATAGTGATAAGGACAAAATAATATGTAACGTGGATGAGAAAGACATAGCCGAACATCTAAGGATAAGGTTGAAGAAAGAACAAGAAGAGAAAGAGGACAAAAGGAGATATAAGGCACAAGCACACCTCTATACAATTATTAAGGTTGCTCGAGATGAGGATCTGACAGAACAAATTGGAAGGGATATTTATTTTGACCTTGTGGACCATGACAAAGTTCATAGTTTCCGTATTCAGAAACAAATGCCCTTTAATCTTTTCAAGGAGGAGGTTGCAAAAGCGTTTGGCATACCAGTGCAGTTTCAGCGTTTCTGGATTTGGGCCAAGAGACAAAACCACACATATCGCCCCAATCGACCATTGACACCTCAGGAAGAAACACAATCGGTTGGACAATTGAGAGAGGTATCAAATAAAACAAACAATGCAGAGCTAAAGCTGTTTTTGGAAGTAGCATTTGGGCTGGATCTACGTCCTATTCCTCCGCTTGACAAAACCAAGGAAGATATTCTTCTTTTCTTTAAGCTTTATGAGCCTGAGAAACGAGAACTACGTTTTGTTGGTAGGTTTTTCGTGAAGAGTTCTAGTAAGCCAGCAGAGATTTTAGGAAAATTAAATCAACTGGCTGGTTTTGCCCCTGAGGAAGAAATTGAACTTTATGAGGAAATTAAGTTTGAGCCTTGTATCATGTGCGAACACCTTGACAAGAAGACCTCATTTCGATTAAGTCAGATTGAAGATGGGGATATTATTTGCTTTCAGAAGTCTACTCCTCTTAAAAGTGAAGAAGAATGTAAATATCCTGATGTTCCTTCGTTTTTGGAATATGTACACAATCGCCAGGTTGTTCATTTCCGTTCTTTGGAGAAACCTAAGGAGGAGGATTTCAGTTTAGAATTGTCAAAGCAACACACTTACGATGATGTGGTGGAGAAGTTGGCTCGCCAAATTGGTTTGGATGATCCCACCAAAATCAGACTCACTGCACATAACTGCTATTCTCAGCAACCTAAGCCCCAACCAATTAAATTTCGGGGAGTAGAGCATTTAACTGATATGTTAGTTCATTACAATCAAAGCTCTGATATTTTGTATTATGAAGTCTTGGACATCCCCCTGCCAGAATTGCAAGGCCTAAAAAATCTAAAAGTTGCTTTTCATCATGCTACAAAAGATGAGGTGGTGATTCACAATATTAGATTGCCCAAACAGAGCACTGTAGGGGATGTGATTAATGTACTTAAAACGAAGGTAGAACTGTCTCACCAAACAGAACTCCGACTGCTTGAGGTTTTCTATCACAAGATCTACAAGATCTTCCCACATGGTGAGAAAATTGAGAATATAAATGACCAGTACTGGACTTTGCGTGCAGAGGAGATTCCAGAAGAAGAGAAAAACTTGGGCCTCCATGATCGCTTGATTCATGTTTACCACTTTACAAAGGACACTGCACAGAACCAGATGCAAGTACAAAATTTTGGGGAACCTTTCTTCTTGGTCATCCATGAAGGTGAAACTTTAGCTGAAGTTAAAGAACGGATACAAAAGAAATTGCAGGTCCCCGATGAGGAGTTCACCAAGTGGAAGTTTGCATTCTTGTCACTTGGTCGTCCAGAGTACTTACAGGATTCTGATGTTGTTTCCAGCCGTTTTCAGAGAAGAGATGTTTATGGTGCATGGGAGCAGTACCTTGGGTTGGAGCACTCTGATAATGCTCCTAAGAGAGCTTATGCAGCAAATCAGAACCGTCACACATATGAGAAGCCGGTTAAAATATACAACTAA
Protein:  
MTMMTPAPLDQQQQEDEEMLVPHSDVVEGPQPMEVAQVEPASTVDSQPVEDPPTMKFTWTIENFTRLNTKKHYSDTFVVGGYKWRILIFPKGNNVDYLSMYLDVADSGTLPYGWSRYAHFSLAVVNQIHTKYSIRKDTQHQFNARESDWGFTSFMLLGDLYDLSRGYLVNDTVVVEAEVAVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYNDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDSDKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRDSDKDKIICNVDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLTEQIGRDIYFDLVDHDKVHSFRIQKQMPFNLFKEEVAKAFGIPVQFQRFWIWAKRQNHTYRPNRPLTPQEETQSVGQLREVSNKTNNAELKLFLEVAFGLDLRPIPPLDKTKEDILLFFKLYEPEKRELRFVGRFFVKSSSKPAEILGKLNQLAGFAPEEEIELYEEIKFEPCIMCEHLDKKTSFRLSQIEDGDIICFQKSTPLKSEEECKYPDVPSFLEYVHNRQVVHFRSLEKPKEEDFSLELSKQHTYDDVVEKLARQIGLDDPTKIRLTAHNCYSQQPKPQPIKFRGVEHLTDMLVHYNQSSDILYYEVLDIPLPELQGLKNLKVAFHHATKDEVVIHNIRLPKQSTVGDVINVLKTKVELSHXQTELRLLEVFYHKIYKIFPHGEKIENINDQYWTLRAEEIPEEEKNLGLHDRLIHVYHFTKDTAQNQMQVQNFGEPFFLVIHEGETLAEVKERIQKKLQVPDEEFTKWKFAFLSLGRPEYLQDSDVVSSRFQRRDVYGAWEQYLGLEHSDNAPKRAYAANQNRHTYEKPVKIYN